Journal: Neuroinformatics

Article Title: Graphical model based multivariate analysis (GAMMA): an open-source, cross-platform neuroimaging data analysis software package

doi: 10.1007/s12021-011-9129-7

Figure Lengend Snippet: A schematic representation of the processing pipeline in GAMMA GUI.

Article Snippet: GAMMA core includes command-line programs, and GAMMA GUI is a Qt-based ( http://trolltech.com/ ) graphical user interface that calls core functions.

Techniques:

Journal: Neuroinformatics

Article Title: Graphical model based multivariate analysis (GAMMA): an open-source, cross-platform neuroimaging data analysis software package

doi: 10.1007/s12021-011-9129-7

Figure Lengend Snippet: Using GAMMA GUI to analyze the Alzheimer’s disease data described in Section 3. Left: Viewing the label field using GAMMA GUI. Right. Using MRIcro to display GAMMA results. The label field is red and is overlaid on the atlas. Images are in radiologic convention.

Article Snippet: GAMMA core includes command-line programs, and GAMMA GUI is a Qt-based ( http://trolltech.com/ ) graphical user interface that calls core functions.

Techniques:

Journal: Microsystems & Nanoengineering

Article Title: A paper-based microfluidic platform with shape-memory-polymer-actuated fluid valves for automated multi-step immunoassays

doi: 10.1038/s41378-019-0091-0

Figure Lengend Snippet: a Photographs of test zones at different IgG concentrations. b Calibration curves of the mean grayscale intensity signal versus the IgG concentration on the test zone ( n = 5). Inset: amplification of the low mean grayscale intensity range (from 0 to 40) of the calibration curves. Signals were measure from the same test zones by the RGB color sensor ( R 2 = 0.993), a desktop scanner ( R 2 = 0.970), and a cellphone camera ( R 2 = 0.894). The RGB color sensor provides higher intensity signals than the scanner and cellphone

Article Snippet: Figure illustrates the graphic user interface (GUI) of Bluetooth communication application (APP) on an Android-based cellphone (XperiaTM Z, SONY).

Techniques: Concentration Assay, Amplification

Journal: JMIR Medical Informatics

Article Title: Successful Integration of EN/ISO 13606–Standardized Extracts From a Patient Mobile App Into an Electronic Health Record: Description of a Methodology

doi: 10.2196/40344

Figure Lengend Snippet: OntoCR GUI for physicians. The ontology modeling the clinical variables is visualized as a web-based structured form. The side effects menu item is selected in the hierarchical menu on the left side of the image. The right side of the image shows the properties regarding patient information, ASCAPE recruitment date, and side effects. ASCAPE: Artificial intelligence Supporting CAncer Patients across Europe; GUI: graphical user interface.

Article Snippet: These elements are used by portlets to create a graphical user interface (GUI) deployed in Liferay [ ], thus allowing users to access, visualize, enter, and modify structured data through a web-based clinical workstation.

Techniques:

Journal: Antimicrobial Agents and Chemotherapy

Article Title: Imidazopyridazine Inhibitors of Plasmodium falciparum Calcium-Dependent Protein Kinase 1 Also Target Cyclic GMP-Dependent Protein Kinase and Heat Shock Protein 90 To Kill the Parasite at Different Stages of Intracellular Development

doi: 10.1128/AAC.01748-15

Figure Lengend Snippet: Affinity purification of cellular targets of compound D. (A) Biotin linked to the R1 group of compound D. This compound was bound to streptavidin-agarose and used to affinity purify proteins from a trophozoite cell lysate. The only significant hit identified by LC-MS/MS was HSP90 (see Table S3 in the supplemental material). (B) Predicted interactions between compound D and PfHSP90. (C) Modeling of the most likely binding orientation of compound D to the ATP binding site of HSP90 was carried out using DockingServer. Residues predicted to form hydrogen bonds with compound D are labeled in green, while those predicted to form hydrophobic interactions are labeled in blue. (D) Recombinant PfHSP90 binds to compound D. Purified recombinant PfHSP90 and PfHSP90-NTD used in subsequent experiments are shown in the Coomassie-stained gels to the left of the figure. Changes in the tryptophan fluorescence (346 nm) of PfHSP90 were monitored in the presence of increasing amounts of compound D or 17-AAG. K d values were calculated for both full-length (FL) PfHSP90 and PfHSP90-NTD. Values in brackets are the standard errors (SE) of the means of triplicate measurements.

Article Snippet: Docking calculations were performed using the web-based graphical user interface (GUI) of DockingServer by Virtua Drug (Budapest, Hungary) ( ).

Techniques: Affinity Purification, Liquid Chromatography with Mass Spectroscopy, Binding Assay, Labeling, Recombinant, Purification, Staining, Fluorescence